Gene detail information of Glyur000075s00007158.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52910.1 | 3.00E-43 | growth-regulating factor 4 |
| NR | XP_007162865.1 | 5.80E-166 | hypothetical protein PHAVU_001G187500g [Phaseolus vulgaris] |
| Swissprot | tr|Q8L8A7|GRF4_ARATH | 3.00E-65 | Growth-regulating factor 4 |
| trEMBL | tr|V7CXL5|V7CXL5_PHAVU | 2.00E-166 | Uncharacterized protein {ECO:0000313|EMBL:ESW34859.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 95010 | 98487 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000075s00007158.1 | PF08880.6 | QLQ | 73 | 95 | 8.70E-07 |
| Glyur000075s00007158.1 | PF08879.5 | WRC | 108 | 151 | 1.40E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.207 |
| SRR1783600 | control | 0.230 |
| SRR1783602 | moderate drought stress | 0.236 |
| SRR1811619 | moderate drought stress | 0.256 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.049 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.196 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.255 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.089 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.385 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.986 |
| SRR2868004 | Drought Stress(Tissue:root) | 6.580 |
| SRR2967015 | Control (Tissue:root) | 8.802 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 5.104 |
| SRR9715740 | Leave | 4.622 |
| SRR9715741 | Leave | 3.269 |
| SRR9715739 | Root | 0.147 |
| SRR9715742 | Root | 1.738 |
| SRR9715743 | Root | 1.425 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.039 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.031 |
| SRR8400027 | Control-Root | 1.783 |