Gene detail information of Glyur000075s00007171.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G36460.10Aldolase superfamily protein
NRXP_003521445.10PREDICTED: fructose-bisphosphate aldolase, cytoplasmic isozyme [Glycine max]
COGYP_002602040.16.00E-123hypothetical protein HRM2_07620 [Desulfobacterium autotrophicum HRM2]
Swissprottr|O65735|ALF_CICAR0Fructose-bisphosphate aldolase, cytoplasmic isozyme
trEMBLtr|I1JPX8|I1JPX8_SOYBN0Fructose-bisphosphate aldolase {ECO:0000256|RuleBase:RU003994}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00075180094183118-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01623ALDO EC:4.1.2.13 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Fructose and mannose metabolismmap00051
Carbon fixation in photosynthetic organismsmap00710
Methane metabolismmap00680


Gene Ontology

biological_process

GO:0006096  glycolytic process


molecular_function

GO:0003824  catalytic activity

GO:0004332  fructose-bisphosphate aldolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000075s00007171.1PF00274.14Glycolytic113581.80E-172


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.720
SRR1783600control23.955
SRR1783602moderate drought stress22.572
SRR1811619moderate drought stress22.246

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain50.820
DRR006520Root Summer glycyrrhizin high producing strain50.046
DRR006521Root Winter glycyrrhizin high producing strain102.400
DRR006522Root Winter glycyrrhizin high producing strain100.112
DRR006523Root Summer glycyrrhizin low producing strain49.629
DRR006524Root Summer glycyrrhizin low producing strain49.306
DRR006525Leaf Summer glycyrrhizin high producing strain44.351
DRR006526Leaf Summer glycyrrhizin high producing strain44.356

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)102.164
SRR2868004Drought Stress(Tissue:root)53.787
SRR2967015Control (Tissue:root)51.473

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave52.207
SRR9715740Leave34.685
SRR9715741Leave47.189
SRR9715739Root36.199
SRR9715742Root45.130
SRR9715743Root41.975

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h35.114
SRR8749028MeJA induced 9h49.900
SRR8749029MeJA induced 9h97.595
SRR8749030Uninduced25.189
SRR8749031Uninduced33.920
SRR8749032Uninduced118.083

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root41.445
SRR8400027Control-Root27.381

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved