Gene detail information of Glyur000075s00007184.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G03760.1 | 0 | Nucleotide-diphospho-sugar transferases superfamily protein |
| NR | XP_003521436.1 | 0 | PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Glycine max] |
| COG | YP_003444820.1 | 1.00E-58 | family 2 glycosyl transferase [Allochromatium vinosum DSM 180] |
| Swissprot | tr|Q9LZR3|CSLA9_ARATH | 0 | Glucomannan 4-beta-mannosyltransferase 9 |
| trEMBL | tr|I1JPW2|I1JPW2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G34800.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00075 | 263305 | 269415 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000075s00007184.1 | PF13641.1 | Glyco_tranf_2_3 | 98 | 294 | 3.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.747 |
| SRR1783600 | control | 0.851 |
| SRR1783602 | moderate drought stress | 0.899 |
| SRR1811619 | moderate drought stress | 0.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.110 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.088 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.218 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.878 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.757 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.793 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 15.913 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.918 |
| SRR2967015 | Control (Tissue:root) | 6.860 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.360 |
| SRR9715740 | Leave | 2.609 |
| SRR9715741 | Leave | 2.510 |
| SRR9715739 | Root | 0.313 |
| SRR9715742 | Root | 3.351 |
| SRR9715743 | Root | 2.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.054 |
| SRR8749029 | MeJA induced 9h | 0.024 |
| SRR8749030 | Uninduced | 0.026 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.035 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.010 |
| SRR8400027 | Control-Root | 2.133 |