Gene detail information of Glyur000076s00018624.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G25110.13.00E-143fatA acyl-ACP thioesterase
NRXP_006602508.10PREDICTED: oleoyl-acyl carrier protein thioesterase 2, chloroplastic-like [Glycine max]
COGYP_431036.19.00E-29Acyl-ACP thioesterase [Moorella thermoacetica ATCC 39073]
Swissprottr|Q42561|FATA1_ARATH2.00E-178Oleoyl-acyl carrier protein thioesterase 1, chloroplastic (Precursor)
trEMBLtr|I1N272|I1N272_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G36130.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00076349868356962-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10782FATA EC:3.1.2.14 Fatty acid biosynthesis map00061


Gene Ontology

biological_process

GO:0006633  fatty acid biosynthetic process


molecular_function

GO:0016790  thiolester hydrolase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000076s00018624.1PF01643.12Acyl-ACP_TE843744.30E-114


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control14.532
SRR1783600control14.516
SRR1783602moderate drought stress7.747
SRR1811619moderate drought stress7.748

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.389
DRR006520Root Summer glycyrrhizin high producing strain13.502
DRR006521Root Winter glycyrrhizin high producing strain2.125
DRR006522Root Winter glycyrrhizin high producing strain2.066
DRR006523Root Summer glycyrrhizin low producing strain7.791
DRR006524Root Summer glycyrrhizin low producing strain7.818
DRR006525Leaf Summer glycyrrhizin high producing strain20.606
DRR006526Leaf Summer glycyrrhizin high producing strain20.587

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)45.503
SRR2868004Drought Stress(Tissue:root)31.100
SRR2967015Control (Tissue:root)24.391

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave37.886
SRR9715740Leave42.417
SRR9715741Leave23.216
SRR9715739Root10.844
SRR9715742Root14.642
SRR9715743Root11.486

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.937
SRR8749028MeJA induced 9h12.598
SRR8749029MeJA induced 9h14.341
SRR8749030Uninduced9.394
SRR8749031Uninduced10.405
SRR8749032Uninduced8.335

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.218
SRR8400027Control-Root40.438

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved