Gene detail information of Glyur000077s00006712.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G19820.30cell elongation protein / DWARF1 / DIMINUTO (DIM)
NRXP_003540724.10PREDICTED: delta(24)-sterol reductase-like isoform X1 [Glycine max]
COGYP_004919129.11.00E-104lipid biosynthetic enzyme, related to human 24-dehydrocholesterol reductase DHCR [Methylomicrobium alcaliphilum 20Z]
Swissprottr|P93472|DIM_PEA0Delta(24)-sterol reductase
trEMBLtr|I1LPL0|I1LPL0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G03210.4}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00077249037252661+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09828DHCR24, DWF1 EC:1.3.1.72 1.3.1.- Steroid biosynthesis map00100


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0008762  UDP-N-acetylmuramate dehydrogenase activity

GO:0016491  oxidoreductase activity

GO:0016614  oxidoreductase activity, acting on CH-OH group of donors

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000077s00006712.1PF01565.18FAD_binding_41091981.10E-15


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control199.027
SRR1783600control199.739
SRR1783602moderate drought stress174.199
SRR1811619moderate drought stress173.350

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain249.052
DRR006520Root Summer glycyrrhizin high producing strain246.202
DRR006521Root Winter glycyrrhizin high producing strain2.487
DRR006522Root Winter glycyrrhizin high producing strain2.372
DRR006523Root Summer glycyrrhizin low producing strain152.308
DRR006524Root Summer glycyrrhizin low producing strain152.194
DRR006525Leaf Summer glycyrrhizin high producing strain21.122
DRR006526Leaf Summer glycyrrhizin high producing strain21.107

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)302.291
SRR2868004Drought Stress(Tissue:root)134.858
SRR2967015Control (Tissue:root)202.914

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.153
SRR9715740Leave12.069
SRR9715741Leave14.456
SRR9715739Root128.042
SRR9715742Root145.193
SRR9715743Root139.975

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h135.113
SRR8749028MeJA induced 9h42.195
SRR8749029MeJA induced 9h53.145
SRR8749030Uninduced1.687
SRR8749031Uninduced0.506
SRR8749032Uninduced8.114

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root177.796
SRR8400027Control-Root210.044

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved