Gene detail information of Glyur000078s00005363.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G76510.22.00E-118ARID/BRIGHT DNA-binding domain-containing protein
NRXP_007135987.10hypothetical protein PHAVU_009G008800g [Phaseolus vulgaris]
Swissprottr|Q0WNR6|ARID5_ARATH1.00E-145AT-rich interactive domain-containing protein 5
trEMBLtr|V7AQP7|V7AQP7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW07982.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00078701414052-


Gene family

Gene familysubfamily
Transcription Factors FamilyARID


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000078s00005363.2PF01388.16ARID1332187.20E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.885
SRR1783600control8.789
SRR1783602moderate drought stress8.250
SRR1811619moderate drought stress8.277

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.374
DRR006520Root Summer glycyrrhizin high producing strain8.180
DRR006521Root Winter glycyrrhizin high producing strain13.576
DRR006522Root Winter glycyrrhizin high producing strain13.110
DRR006523Root Summer glycyrrhizin low producing strain9.074
DRR006524Root Summer glycyrrhizin low producing strain9.034
DRR006525Leaf Summer glycyrrhizin high producing strain6.843
DRR006526Leaf Summer glycyrrhizin high producing strain6.741

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.175
SRR2868004Drought Stress(Tissue:root)12.875
SRR2967015Control (Tissue:root)12.549

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.813
SRR9715740Leave9.814
SRR9715741Leave10.386
SRR9715739Root2.667
SRR9715742Root6.733
SRR9715743Root5.368

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.235
SRR8749028MeJA induced 9h15.091
SRR8749029MeJA induced 9h15.035
SRR8749030Uninduced7.893
SRR8749031Uninduced5.414
SRR8749032Uninduced7.950

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.220
SRR8400027Control-Root13.403

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved