Gene detail information of Glyur000078s00005384.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34440.1 | 1.00E-124 | Protein kinase superfamily protein |
| NR | XP_006579023.1 | 0 | PREDICTED: proline-rich receptor-like protein kinase PERK7-like [Glycine max] |
| COG | YP_872155.1 | 3.00E-18 | serine/threonine protein kinase [Acidothermus cellulolyticus 11B] |
| Swissprot | tr|Q8GX23|PERK5_ARATH | 7.00E-152 | Proline-rich receptor-like protein kinase PERK5 |
| trEMBL | tr|K7KHK0|K7KHK0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G01480.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 97350 | 100530 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.6.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005384.1 | PF07714.12 | Pkinase_Tyr | 265 | 337 | 2.50E-10 |
| Glyur000078s00005384.1 | PF00069.20 | Pkinase | 338 | 442 | 1.30E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.015 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 1.407 |
| SRR1811619 | moderate drought stress | 1.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.879 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.821 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.455 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.532 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.496 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.973 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.905 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.916 |
| SRR2868004 | Drought Stress(Tissue:root) | 2.194 |
| SRR2967015 | Control (Tissue:root) | 2.049 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.001 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.501 |
| SRR8749028 | MeJA induced 9h | 4.052 |
| SRR8749029 | MeJA induced 9h | 4.169 |
| SRR8749030 | Uninduced | 5.494 |
| SRR8749031 | Uninduced | 3.321 |
| SRR8749032 | Uninduced | 3.943 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.210 |
| SRR8400027 | Control-Root | 0.022 |