Gene detail

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Gene detail information of Glyur000078s00005391.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G34500.1	4.00E-90	Protein kinase superfamily protein
NR	XP_004507426.1	3.66E-142	PREDICTED: probable receptor-like serine/threonine-protein kinase At4g34500-like [Cicer arietinum]
COG	NP_811683.1	3.00E-09	serine/threonine-protein kinase pknB [Bacteroides thetaiotaomicron VPI-5482]
Swissprot	tr\|Q6NKZ9\|Y4345_ARATH	2.00E-110	Probable receptor-like serine/threonine-protein kinase At4g34500
trEMBL	tr\|V7ARI0\|V7ARI0_PHAVU	3.00E-142	Uncharacterized protein {ECO:0000313\|EMBL:ESW08164.1}

Sequence

Transcript Sequence

>Glyur000078s00005391.1
ATGGCAGCTTCCGGCGGTGCTCTGCCGTTGCTAACTAACCGAACCCCCATTCTGGGTCTCAAACTCTACATCTTAATCCTCATTTTCGTTGCAATCGTGGTCGCAGTCGTTCTCCTCGTATCTCTCTGCATTCGCCGGAGCCGAAGCTCCGAGAAGCGCAAAATGCGAGAGCTGGAGATTGCGACTAATGGTTTTGCAGAAGGGAACGTGATCGGTGAAGGAGGGTATGGGATCGTGTACAGAGGAGTTCTGCAAGACGGTTCTGTCGTCGCTGTCAAGAATCTTCTCAACAACAAGGGTCAAGCAGAAAAAGAGTTTAAGGTGGAGGTTGAAGCCATCGGAAAAGTTAGGCACAAGAATTTGGTCGGACTAGTTGGATATTGTGCAGAAGGTGCTAAAAGGATGCTTGTTTATGAATATGTTGACAATGGAAATTTGGAGCAGTGGCTACATGGTGATGTTGGACCCGTTAGCCCCTTGACATGGGACATACGAATGAAGATTGCCGTTGCAACTGCAAAAGGATATGTTTCACCCGAGTATGCAAGCACAGGTATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTTATGGAGCTAGTTACAGGAAGAAGTCCCATTGACTATTCTAGACCACCTGGAGAGATGAACTTGGTTGATTGGTTTAAGGGAATGGTAGCAAGTCGCCGTGGTGATGAACTAGTTGATCCTTTAATTGAGATTCAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTACTGGTTTGTCTGCGTTGTATAGATTTGGATGCCAGTAAGCGACCTAAGATGGGTCAAATTGTTCATATGCTCGAGGCNGATGATTTTCCCTTTCGTTCTGAACCTCGAACAACTAGAGGGAAAGATCCTGTTCCCTCTCAAGCAGAAGTTTCCAGTAAGGTTCCGTTTCCAACAAGGCATGTGGAGCCCGTATATAAATCAAGCTGGAGGAGATGA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00078	131255	134402	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.6.3

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000078s00005391.1	PF07714.12	Pkinase_Tyr	68	176	2.10E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.927
SRR1783600	control	5.135
SRR1783602	moderate drought stress	2.504
SRR1811619	moderate drought stress	2.074

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.640
DRR006520	Root Summer glycyrrhizin high producing strain	9.538
DRR006521	Root Winter glycyrrhizin high producing strain	0.105
DRR006522	Root Winter glycyrrhizin high producing strain	0.109
DRR006523	Root Summer glycyrrhizin low producing strain	3.201
DRR006524	Root Summer glycyrrhizin low producing strain	3.250
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.984
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.607

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	13.359
SRR2868004	Drought Stress(Tissue:root)	8.994
SRR2967015	Control (Tissue:root)	9.952

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.711
SRR9715740	Leave	0.209
SRR9715741	Leave	0.248
SRR9715739	Root	5.865
SRR9715742	Root	2.266
SRR9715743	Root	3.322

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.665
SRR8749028	MeJA induced 9h	0.209
SRR8749029	MeJA induced 9h	1.145
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.010

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	12.834
SRR8400027	Control-Root	15.917