Gene detail information of Glyur000078s00005397.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G39250.1 | 2.00E-25 | RAD-like 1 |
| NR | KHN25378.1 | 6.24E-49 | hypothetical protein glysoja_010295 [Glycine soja] |
| Swissprot | tr|Q1A173|RADL6_ARATH | 6.00E-34 | Protein RADIALIS-like 6 |
| trEMBL | tr|K7LSY9|K7LSY9_SOYBN | 3.00E-49 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G04680.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00078 | 167083 | 167328 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000078s00005397.1 | PF00249.26 | Myb_DNA-binding | 15 | 61 | 1.40E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.294 |
| SRR1783600 | control | 0.141 |
| SRR1783602 | moderate drought stress | 0.351 |
| SRR1811619 | moderate drought stress | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.283 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.045 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.454 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.369 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.540 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.543 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.532 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.674 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.349 |
| SRR2967015 | Control (Tissue:root) | 0.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.918 |
| SRR9715740 | Leave | 4.607 |
| SRR9715741 | Leave | 8.790 |
| SRR9715739 | Root | 0.253 |
| SRR9715742 | Root | 0.372 |
| SRR9715743 | Root | 0.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.133 |
| SRR8400027 | Control-Root | 0.060 |