Gene detail information of Glyur000078s00005407.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G39210.10Glucose-1-phosphate adenylyltransferase family protein
NRXP_003522921.10PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1-like isoform X1 [Glycine max]
COGYP_005068635.10glucose-1-phosphate adenylyltransferase [Arthrospira platensis NIES-39]
Swissprottr|Q00081|GLGL1_SOLTU0Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment)
trEMBLtr|K7KHJ1|K7KHJ1_SOYBN0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00078212928217627-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00975glgC EC:2.7.7.27 Starch and sucrose metabolism map00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026


Gene Ontology

biological_process

GO:0005978  glycogen biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0008878  glucose-1-phosphate adenylyltransferase activity

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000078s00005407.1PF00483.18NTP_transferase1013774.20E-79


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control371.047
SRR1783600control373.992
SRR1783602moderate drought stress327.948
SRR1811619moderate drought stress327.091

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain147.883
DRR006520Root Summer glycyrrhizin high producing strain146.482
DRR006521Root Winter glycyrrhizin high producing strain6.929
DRR006522Root Winter glycyrrhizin high producing strain6.863
DRR006523Root Summer glycyrrhizin low producing strain100.690
DRR006524Root Summer glycyrrhizin low producing strain100.723
DRR006525Leaf Summer glycyrrhizin high producing strain123.832
DRR006526Leaf Summer glycyrrhizin high producing strain123.319

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.082
SRR2868004Drought Stress(Tissue:root)23.472
SRR2967015Control (Tissue:root)23.972

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave87.810
SRR9715740Leave79.393
SRR9715741Leave82.536
SRR9715739Root41.759
SRR9715742Root121.281
SRR9715743Root107.365

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.103
SRR8749028MeJA induced 9h11.719
SRR8749029MeJA induced 9h12.725
SRR8749030Uninduced1.501
SRR8749031Uninduced1.085
SRR8749032Uninduced0.974

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root119.876
SRR8400027Control-Root139.801

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved