Gene detail information of Glyur000078s00005413.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G34300.10lectin protein kinase family protein
NRXP_004515104.10PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum]
COGYP_001958461.15.00E-26hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9XID3|Y1343_ARATH0G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 (Precursor)
trEMBLtr|V7C4R4|V7C4R4_PHAVU0Serine/threonine-protein kinase {ECO:0000256|PIRNR:PIRNR000641}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00078228631231153-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.9.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0048544  recognition of pollen


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000078s00005413.1PF01453.19B_lectin781644.00E-18
Glyur000078s00005413.1PF00954.15S_locus_glycop2413032.50E-09
Glyur000078s00005413.1PF00069.20Pkinase4997685.30E-49


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.815
SRR1783600control15.013
SRR1783602moderate drought stress12.962
SRR1811619moderate drought stress15.286

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain10.698
DRR006520Root Summer glycyrrhizin high producing strain10.094
DRR006521Root Winter glycyrrhizin high producing strain8.350
DRR006522Root Winter glycyrrhizin high producing strain8.334
DRR006523Root Summer glycyrrhizin low producing strain28.460
DRR006524Root Summer glycyrrhizin low producing strain27.788
DRR006525Leaf Summer glycyrrhizin high producing strain15.950
DRR006526Leaf Summer glycyrrhizin high producing strain16.326

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)23.543
SRR2868004Drought Stress(Tissue:root)29.530
SRR2967015Control (Tissue:root)28.036

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave36.226
SRR9715740Leave30.218
SRR9715741Leave50.844
SRR9715739Root11.007
SRR9715742Root24.413
SRR9715743Root20.740

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.211
SRR8749028MeJA induced 9h21.663
SRR8749029MeJA induced 9h17.583
SRR8749030Uninduced68.467
SRR8749031Uninduced31.550
SRR8749032Uninduced19.070

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.442
SRR8400027Control-Root15.172

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved