Gene detail information of Glyur000078s00005423.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT1G19640.1 | 6.00E-62 | jasmonic acid carboxyl methyltransferase |
NR | XP_004500800.1 | 0 | PREDICTED: theobromine synthase 2-like [Cicer arietinum] |
Swissprot | tr|Q8H0G0|CTS2_COFAR | 6.00E-107 | Theobromine synthase 2 |
trEMBL | tr|G7J763|G7J763_MEDTR | 0 | Salicylic acid carboxyl methyltransferase {ECO:0000313|EMBL:AES74212.1} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00078 | 269863 | 271705 | + |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K08241 | E2.1.1.141 | EC:2.1.1.141 | alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000078s00005423.1 | PF03492.10 | Methyltransf_7 | 46 | 363 | 4.30E-111 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 0.951 |
SRR1783600 | control | 0.933 |
SRR1783602 | moderate drought stress | 0.625 |
SRR1811619 | moderate drought stress | 0.622 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 0.282 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 0.241 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 0.251 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 0.243 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 1.478 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 1.652 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.294 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.424 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 88.606 |
SRR2868004 | Drought Stress(Tissue:root) | 79.021 |
SRR2967015 | Control (Tissue:root) | 90.499 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 13.872 |
SRR9715740 | Leave | 3.299 |
SRR9715741 | Leave | 11.563 |
SRR9715739 | Root | 2.248 |
SRR9715742 | Root | 7.911 |
SRR9715743 | Root | 7.683 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 4.396 |
SRR8749028 | MeJA induced 9h | 2.721 |
SRR8749029 | MeJA induced 9h | 3.476 |
SRR8749030 | Uninduced | 8.804 |
SRR8749031 | Uninduced | 7.457 |
SRR8749032 | Uninduced | 2.725 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 7.205 |
SRR8400027 | Control-Root | 8.091 |