Gene detail information of Glyur000078s00005423.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G19640.16.00E-62jasmonic acid carboxyl methyltransferase
NRXP_004500800.10PREDICTED: theobromine synthase 2-like [Cicer arietinum]
Swissprottr|Q8H0G0|CTS2_COFAR6.00E-107Theobromine synthase 2
trEMBLtr|G7J763|G7J763_MEDTR0Salicylic acid carboxyl methyltransferase {ECO:0000313|EMBL:AES74212.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00078269863271705+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K08241E2.1.1.141 EC:2.1.1.141 alpha-Linolenic acid metabolism map00592


Gene Ontology

molecular_function

GO:0008168  methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000078s00005423.1PF03492.10Methyltransf_7463634.30E-111


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.951
SRR1783600control0.933
SRR1783602moderate drought stress0.625
SRR1811619moderate drought stress0.622

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.282
DRR006520Root Summer glycyrrhizin high producing strain0.241
DRR006521Root Winter glycyrrhizin high producing strain0.251
DRR006522Root Winter glycyrrhizin high producing strain0.243
DRR006523Root Summer glycyrrhizin low producing strain1.478
DRR006524Root Summer glycyrrhizin low producing strain1.652
DRR006525Leaf Summer glycyrrhizin high producing strain2.294
DRR006526Leaf Summer glycyrrhizin high producing strain2.424

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)88.606
SRR2868004Drought Stress(Tissue:root)79.021
SRR2967015Control (Tissue:root)90.499

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.872
SRR9715740Leave3.299
SRR9715741Leave11.563
SRR9715739Root2.248
SRR9715742Root7.911
SRR9715743Root7.683

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.396
SRR8749028MeJA induced 9h2.721
SRR8749029MeJA induced 9h3.476
SRR8749030Uninduced8.804
SRR8749031Uninduced7.457
SRR8749032Uninduced2.725

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.205
SRR8400027Control-Root8.091