Gene detail information of Glyur000078s00005433.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G75390.12.00E-41basic leucine-zipper 44
NRXP_007135953.11.84E-76hypothetical protein PHAVU_009G005800g [Phaseolus vulgaris]
Swissprottr|P24068|OCS1_MAIZE3.00E-22Ocs element-binding factor 1
trEMBLtr|T2DNR1|T2DNR1_PHAVU7.00E-77Uncharacterized protein {ECO:0000313|EMBL:ESW07947.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00078314350314820+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000078s00005433.1PF00170.16bZIP_130881.40E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control304.541
SRR1783600control325.663
SRR1783602moderate drought stress210.510
SRR1811619moderate drought stress327.769

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain258.378
DRR006520Root Summer glycyrrhizin high producing strain279.973
DRR006521Root Winter glycyrrhizin high producing strain127.291
DRR006522Root Winter glycyrrhizin high producing strain118.949
DRR006523Root Summer glycyrrhizin low producing strain409.647
DRR006524Root Summer glycyrrhizin low producing strain423.085
DRR006525Leaf Summer glycyrrhizin high producing strain2.312
DRR006526Leaf Summer glycyrrhizin high producing strain2.157

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)164.777
SRR2868004Drought Stress(Tissue:root)125.611
SRR2967015Control (Tissue:root)186.048

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.973
SRR9715740Leave18.159
SRR9715741Leave19.543
SRR9715739Root560.349
SRR9715742Root243.393
SRR9715743Root419.013

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h51.155
SRR8749028MeJA induced 9h70.792
SRR8749029MeJA induced 9h89.069
SRR8749030Uninduced65.982
SRR8749031Uninduced124.907
SRR8749032Uninduced294.679

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root180.044
SRR8400027Control-Root213.824

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved