Gene detail information of Glyur000079s00008906.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36750.12.00E-88Quinone reductase family protein
NRXP_007156906.16.91E-141hypothetical protein PHAVU_002G027100g [Phaseolus vulgaris]
COGYP_003689738.13.00E-58flavoprotein WrbA [Desulfurivibrio alkaliphilus AHT2]
Swissprottr|O23207|FQRL2_ARATH1.00E-126Probable NAD(P)H dehydrogenase (quinone) FQR1-like 2 {ECO:0000305}
trEMBLtr|V7CHY9|V7CHY9_PHAVU3.00E-141Uncharacterized protein {ECO:0000313|EMBL:ESW28900.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000794996053079-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K03809wrbA EC:1.6.5.2 Ubiquinone and other terpenoid-quinone biosynthesis map00130


Gene Ontology

biological_process

GO:0045892  negative regulation of transcription, DNA-templated


molecular_function

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000079s00008906.1PF03358.10FMN_red892021.00E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.890
SRR1783600control9.851
SRR1783602moderate drought stress9.976
SRR1811619moderate drought stress9.904

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.114
DRR006520Root Summer glycyrrhizin high producing strain20.041
DRR006521Root Winter glycyrrhizin high producing strain12.539
DRR006522Root Winter glycyrrhizin high producing strain12.410
DRR006523Root Summer glycyrrhizin low producing strain19.224
DRR006524Root Summer glycyrrhizin low producing strain19.118
DRR006525Leaf Summer glycyrrhizin high producing strain8.838
DRR006526Leaf Summer glycyrrhizin high producing strain8.598

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)33.094
SRR2868004Drought Stress(Tissue:root)30.792
SRR2967015Control (Tissue:root)27.921

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave18.347
SRR9715740Leave12.374
SRR9715741Leave14.534
SRR9715739Root59.914
SRR9715742Root33.679
SRR9715743Root32.079

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h39.604
SRR8749028MeJA induced 9h28.263
SRR8749029MeJA induced 9h35.662
SRR8749030Uninduced9.364
SRR8749031Uninduced4.183
SRR8749032Uninduced11.884

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root52.593
SRR8400027Control-Root56.528

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved