Gene detail information of Glyur000079s00008909.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G66710.1 | 1.00E-57 | Protein kinase superfamily protein |
| NR | XP_004512221.1 | 1.15E-115 | PREDICTED: serine/threonine-protein kinase HT1-like [Cicer arietinum] |
| COG | NP_869262.1 | 6.00E-20 | serine/threonine-protein kinase pknH [Rhodopirellula baltica SH 1] |
| Swissprot | tr|Q2MHE4|HT1_ARATH | 6.00E-38 | Serine/threonine-protein kinase HT1 |
| trEMBL | tr|K7MHB2|K7MHB2_SOYBN | 9.00E-92 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G25611.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00079 | 73253 | 75279 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:2.1.5 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000079s00008909.1 | PF00069.20 | Pkinase | 8 | 196 | 1.00E-35 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.116 |
| SRR1783600 | control | 0.125 |
| SRR1783602 | moderate drought stress | 0.021 |
| SRR1811619 | moderate drought stress | 0.022 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.000 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.043 |
| SRR2967015 | Control (Tissue:root) | 0.001 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.113 |
| SRR9715740 | Leave | 0.082 |
| SRR9715741 | Leave | 0.065 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.104 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.009 |
| SRR8400027 | Control-Root | 0.012 |