Gene detail information of Glyur000079s00008913.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G36730.15.00E-79G-box binding factor 1
NRKHN36143.11.22E-179G-box-binding factor 1 [Glycine soja]
Swissprottr|P42774|GBF1_ARATH1.00E-106G-box-binding factor 1
trEMBLtr|I1LHN8|I1LHN8_SOYBN7.00E-175Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G06960.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000799400599667+


Gene family

Gene familysubfamily
Transcription Factors FamilybZIP


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006351  transcription, DNA-templated

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005634  nucleus


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000079s00008913.1PF07777.6MFMR11728.90E-47
Glyur000079s00008913.1PF00170.16bZIP_12603223.10E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.825
SRR1783600control9.634
SRR1783602moderate drought stress10.602
SRR1811619moderate drought stress10.497

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.002
DRR006520Root Summer glycyrrhizin high producing strain13.084
DRR006521Root Winter glycyrrhizin high producing strain38.283
DRR006522Root Winter glycyrrhizin high producing strain36.500
DRR006523Root Summer glycyrrhizin low producing strain33.853
DRR006524Root Summer glycyrrhizin low producing strain33.750
DRR006525Leaf Summer glycyrrhizin high producing strain9.792
DRR006526Leaf Summer glycyrrhizin high producing strain9.538

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)27.267
SRR2868004Drought Stress(Tissue:root)38.754
SRR2967015Control (Tissue:root)44.565

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave54.023
SRR9715740Leave43.561
SRR9715741Leave65.959
SRR9715739Root6.660
SRR9715742Root23.742
SRR9715743Root21.429

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.411
SRR8749028MeJA induced 9h35.976
SRR8749029MeJA induced 9h46.052
SRR8749030Uninduced57.298
SRR8749031Uninduced116.187
SRR8749032Uninduced100.059

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root34.273
SRR8400027Control-Root32.356

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved