Gene detail information of Glyur000080s00008658.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G06050.31.00E-21oxophytodienoate-reductase 3
NRACU18795.11.12E-30unknown [Glycine max]
COGYP_004043768.12.00E-13NADH:flavin oxidoreductase [Paludibacter propionicigenes WB4]
Swissprottr|Q9FUP0|OPR3_ARATH1.00E-2712-oxophytodienoate reductase 3
trEMBLtr|C6TAE3|C6TAE3_SOYBN4.00E-31Putative uncharacterized protein {ECO:0000313|EMBL:ACU18795.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00080956710140-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05894OPR EC:1.3.1.42 alpha-Linolenic acid metabolism map00592


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0003824  catalytic activity

GO:0010181  FMN binding

GO:0016491  oxidoreductase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000080s00008658.1PF00724.15Oxidored_FMN14779.60E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.185
SRR1783600control0.255
SRR1783602moderate drought stress0.096
SRR1811619moderate drought stress0.097

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.702
DRR006520Root Summer glycyrrhizin high producing strain5.993
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.556
DRR006523Root Summer glycyrrhizin low producing strain3.021
DRR006524Root Summer glycyrrhizin low producing strain2.214
DRR006525Leaf Summer glycyrrhizin high producing strain5.194
DRR006526Leaf Summer glycyrrhizin high producing strain4.612

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)9.631
SRR2868004Drought Stress(Tissue:root)75.424
SRR2967015Control (Tissue:root)19.409

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave51.012
SRR9715740Leave14.402
SRR9715741Leave84.616
SRR9715739Root2.287
SRR9715742Root12.684
SRR9715743Root9.036

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.716
SRR8749028MeJA induced 9h9.410
SRR8749029MeJA induced 9h7.713
SRR8749030Uninduced289.992
SRR8749031Uninduced324.004
SRR8749032Uninduced88.800

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.706
SRR8400027Control-Root4.924

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved