Gene detail information of Glyur000080s00008660.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13960.1 | 5.00E-46 | growth-regulating factor 5 |
| NR | XP_007154592.1 | 0 | hypothetical protein PHAVU_003G131800g [Phaseolus vulgaris] |
| Swissprot | tr|Q8L8A6|GRF5_ARATH | 8.00E-54 | Growth-regulating factor 5 |
| trEMBL | tr|V7CCG7|V7CCG7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW26586.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 28362 | 29940 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000080s00008660.1 | PF08880.6 | QLQ | 8 | 42 | 1.10E-15 |
| Glyur000080s00008660.1 | PF08879.5 | WRC | 77 | 120 | 3.70E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.802 |
| SRR1783600 | control | 0.715 |
| SRR1783602 | moderate drought stress | 1.739 |
| SRR1811619 | moderate drought stress | 1.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.246 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.264 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.448 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.532 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.692 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.528 |
| SRR2967015 | Control (Tissue:root) | 0.959 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.098 |
| SRR9715740 | Leave | 0.020 |
| SRR9715741 | Leave | 0.044 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.091 |
| SRR9715743 | Root | 0.321 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.050 |
| SRR8749030 | Uninduced | 0.040 |
| SRR8749031 | Uninduced | 0.062 |
| SRR8749032 | Uninduced | 0.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.373 |
| SRR8400027 | Control-Root | 0.589 |