Gene detail information of Glyur000080s00008676.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72830.1 | 5.00E-32 | nuclear factor Y, subunit A3 |
| NR | XP_003542351.1 | 1.21E-88 | PREDICTED: nuclear transcription factor Y subunit A-3-like isoform 2 [Glycine max] |
| Swissprot | tr|Q93ZH2|NFYA3_ARATH | 5.00E-37 | Nuclear transcription factor Y subunit A-3 |
| trEMBL | tr|I1LY31|I1LY31_SOYBN | 5.00E-89 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G16770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 134686 | 137748 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NF-YA |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000080s00008676.1 | PF02045.10 | CBFB_NFYA | 57 | 113 | 9.30E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 59.000 |
| SRR1783600 | control | 59.398 |
| SRR1783602 | moderate drought stress | 96.639 |
| SRR1811619 | moderate drought stress | 96.361 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.349 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 34.801 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 790.148 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 781.991 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 37.737 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.958 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.003 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 18.599 |
| SRR2868004 | Drought Stress(Tissue:root) | 32.405 |
| SRR2967015 | Control (Tissue:root) | 83.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.669 |
| SRR9715740 | Leave | 9.426 |
| SRR9715741 | Leave | 7.886 |
| SRR9715739 | Root | 32.153 |
| SRR9715742 | Root | 42.134 |
| SRR9715743 | Root | 42.480 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.024 |
| SRR8749028 | MeJA induced 9h | 11.759 |
| SRR8749029 | MeJA induced 9h | 15.116 |
| SRR8749030 | Uninduced | 7.950 |
| SRR8749031 | Uninduced | 15.166 |
| SRR8749032 | Uninduced | 16.028 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 49.833 |
| SRR8400027 | Control-Root | 46.151 |