Gene detail information of Glyur000080s00008682.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G29840.10Pyridoxal-5'-phosphate-dependent enzyme family protein
NRXP_004507971.10PREDICTED: threonine synthase 1, chloroplastic-like [Cicer arietinum]
COGYP_002463167.10threonine synthase [Chloroflexus aggregans DSM 9485]
Swissprottr|Q9S7B5|THRC1_ARATH0Threonine synthase 1, chloroplastic (Precursor)
trEMBLtr|L0EIQ2|L0EIQ2_CICAR0Threonine synthase {ECO:0000313|EMBL:AGA60118.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00080179416180999+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01733thrC EC:4.2.3.1 Biosynthesis of amino acids map01230
Glycine, serine and threonine metabolismmap00260
Vitamin B6 metabolismmap00750


Gene Ontology

biological_process

GO:0006520  cellular amino acid metabolic process


molecular_function

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000080s00008682.1PF00291.20PALP1854752.10E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.358
SRR1783600control9.158
SRR1783602moderate drought stress17.360
SRR1811619moderate drought stress17.740

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain79.262
DRR006520Root Summer glycyrrhizin high producing strain77.835
DRR006521Root Winter glycyrrhizin high producing strain3.118
DRR006522Root Winter glycyrrhizin high producing strain3.035
DRR006523Root Summer glycyrrhizin low producing strain13.601
DRR006524Root Summer glycyrrhizin low producing strain14.155
DRR006525Leaf Summer glycyrrhizin high producing strain56.968
DRR006526Leaf Summer glycyrrhizin high producing strain56.625

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.364
SRR2868004Drought Stress(Tissue:root)53.572
SRR2967015Control (Tissue:root)46.291

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave46.560
SRR9715740Leave62.774
SRR9715741Leave66.712
SRR9715739Root40.978
SRR9715742Root120.391
SRR9715743Root105.513

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.115
SRR8749028MeJA induced 9h4.144
SRR8749029MeJA induced 9h2.243
SRR8749030Uninduced5.526
SRR8749031Uninduced2.211
SRR8749032Uninduced1.663

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root44.487
SRR8400027Control-Root34.009

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved