Gene detail information of Glyur000080s00008688.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G72770.35.00E-110homology to ABI1
NRXP_004507966.10PREDICTED: probable protein phosphatase 2C 6-like [Cicer arietinum]
Swissprottr|Q0JLP9|P2C06_ORYSJ2.00E-139Probable protein phosphatase 2C 6
trEMBLtr|V7C8V2|V7C8V2_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW26617.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00080201701206624-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14497PP2C EC:3.1.3.16 MAPK signaling pathway - plant map04016
Plant hormone signal transductionmap04075
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


molecular_function

GO:0003824  catalytic activity

GO:0004722  protein serine/threonine phosphatase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000080s00008688.1PF00481.16PP2C2115046.50E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.672
SRR1783600control18.377
SRR1783602moderate drought stress17.889
SRR1811619moderate drought stress18.374

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.134
DRR006520Root Summer glycyrrhizin high producing strain21.780
DRR006521Root Winter glycyrrhizin high producing strain22.112
DRR006522Root Winter glycyrrhizin high producing strain21.681
DRR006523Root Summer glycyrrhizin low producing strain24.308
DRR006524Root Summer glycyrrhizin low producing strain24.240
DRR006525Leaf Summer glycyrrhizin high producing strain14.434
DRR006526Leaf Summer glycyrrhizin high producing strain14.479

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)29.717
SRR2868004Drought Stress(Tissue:root)48.942
SRR2967015Control (Tissue:root)45.411

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.777
SRR9715740Leave25.933
SRR9715741Leave26.668
SRR9715739Root3.612
SRR9715742Root14.061
SRR9715743Root12.555

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.180
SRR8749028MeJA induced 9h31.694
SRR8749029MeJA induced 9h18.467
SRR8749030Uninduced27.641
SRR8749031Uninduced20.440
SRR8749032Uninduced14.210

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.775
SRR8400027Control-Root24.898

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved