Gene detail information of Glyur000080s00008702.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G19450.1 | 0 | membrane bound O-acyl transferase (MBOAT) family protein |
| NR | XP_004507953.1 | 0 | PREDICTED: diacylglycerol O-acyltransferase 1-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9SLD2|DGAT1_ARATH | 0 | Diacylglycerol O-acyltransferase 1 |
| trEMBL | tr|I1MSF2|I1MSF2_SOYBN | 0 | O-acyltransferase {ECO:0000256|PIRNR:PIRNR000439} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00080 | 276617 | 284839 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K11155 | DGAT1 | EC:2.3.1.20 2.3.1.75 2.3.1.76 | Glycerolipid metabolism | map00561 |
| Retinol metabolism | map00830 | |||
| Fat digestion and absorption | map04975 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000080s00008702.1 | PF03062.14 | MBOAT | 279 | 485 | 2.60E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.922 |
| SRR1783600 | control | 4.965 |
| SRR1783602 | moderate drought stress | 6.425 |
| SRR1811619 | moderate drought stress | 6.435 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.653 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.646 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.848 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.636 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.126 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.233 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.007 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.086 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 13.518 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.927 |
| SRR2967015 | Control (Tissue:root) | 18.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 8.059 |
| SRR9715740 | Leave | 8.052 |
| SRR9715741 | Leave | 10.163 |
| SRR9715739 | Root | 5.414 |
| SRR9715742 | Root | 9.284 |
| SRR9715743 | Root | 7.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.611 |
| SRR8749028 | MeJA induced 9h | 4.858 |
| SRR8749029 | MeJA induced 9h | 2.954 |
| SRR8749030 | Uninduced | 8.743 |
| SRR8749031 | Uninduced | 7.958 |
| SRR8749032 | Uninduced | 4.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 12.030 |
| SRR8400027 | Control-Root | 11.369 |