Gene detail information of Glyur000080s00008704.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G26100.10casein kinase 1
NRXP_003542336.10PREDICTED: casein kinase I isoform delta-like isoform 1 [Glycine max]
COGYP_632759.11.00E-17serine/threonine-protein kinase PKN1 [Myxococcus xanthus DK 1622]
Swissprottr|P42158|KC1D_ARATH0Casein kinase I isoform delta-like
trEMBLtr|I1MSF4|I1MSF4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G06140.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00080289626295103-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:3.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K02218CSNK1, CKI EC:2.7.11.1 MAPK signaling pathway - yeast map04011
Hippo signaling pathway - multiple speciesmap04392


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000080s00008704.1PF00069.20Pkinase92435.80E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control62.954
SRR1783600control63.260
SRR1783602moderate drought stress51.536
SRR1811619moderate drought stress50.878

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain56.664
DRR006520Root Summer glycyrrhizin high producing strain56.143
DRR006521Root Winter glycyrrhizin high producing strain34.805
DRR006522Root Winter glycyrrhizin high producing strain34.487
DRR006523Root Summer glycyrrhizin low producing strain64.020
DRR006524Root Summer glycyrrhizin low producing strain64.331
DRR006525Leaf Summer glycyrrhizin high producing strain32.540
DRR006526Leaf Summer glycyrrhizin high producing strain32.232

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)75.178
SRR2868004Drought Stress(Tissue:root)93.964
SRR2967015Control (Tissue:root)78.705

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave53.673
SRR9715740Leave42.946
SRR9715741Leave59.025
SRR9715739Root17.153
SRR9715742Root43.386
SRR9715743Root43.026

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.288
SRR8749028MeJA induced 9h33.993
SRR8749029MeJA induced 9h19.160
SRR8749030Uninduced59.428
SRR8749031Uninduced66.879
SRR8749032Uninduced36.881

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root101.678
SRR8400027Control-Root102.651

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved