Gene detail information of Glyur000081s00006734.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02790.1 | 6.00E-56 | Glutathione S-transferase family protein |
| NR | XP_004493928.1 | 1.02E-97 | PREDICTED: glutathione S-transferase L3-like isoform X1 [Cicer arietinum] |
| COG | YP_007064354.1 | 1.00E-14 | glutathione S-transferase [Calothrix sp. PCC 7507] |
| Swissprot | tr|Q9LZ06|GSTL3_ARATH | 3.00E-69 | Glutathione S-transferase L3 |
| trEMBL | tr|T2DNZ6|T2DNZ6_PHAVU | 2.00E-80 | In2-1 protein {ECO:0000313|EMBL:AGV54665.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 13326 | 14834 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000081s00006734.1 | PF13417.1 | GST_N_3 | 2 | 30 | 9.90E-05 |
| Glyur000081s00006734.1 | PF13410.1 | GST_C_2 | 66 | 130 | 2.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 37.917 |
| SRR1783600 | control | 37.974 |
| SRR1783602 | moderate drought stress | 62.993 |
| SRR1811619 | moderate drought stress | 62.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 81.040 |
| SRR2868004 | Drought Stress(Tissue:root) | 194.592 |
| SRR2967015 | Control (Tissue:root) | 98.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.545 |
| SRR9715740 | Leave | 0.262 |
| SRR9715741 | Leave | 5.278 |
| SRR9715739 | Root | 12.122 |
| SRR9715742 | Root | 26.084 |
| SRR9715743 | Root | 25.368 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 320.261 |
| SRR8749028 | MeJA induced 9h | 414.199 |
| SRR8749029 | MeJA induced 9h | 507.824 |
| SRR8749030 | Uninduced | 1249.445 |
| SRR8749031 | Uninduced | 1628.750 |
| SRR8749032 | Uninduced | 935.373 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 194.918 |
| SRR8400027 | Control-Root | 159.649 |