Gene detail information of Glyur000081s00006736.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G02800.14.00E-124Protein kinase superfamily protein
NRXP_003521368.10PREDICTED: serine/threonine-protein kinase PBS1-like [Glycine max]
COGYP_007116828.17.00E-16serine/threonine protein kinase [Oscillatoria nigro-viridis PCC 7112]
Swissprottr|Q0WRY5|CDL1_ARATH7.00E-163Serine/threonine-protein kinase CDL1 {ECO:0000305}
trEMBLtr|I1JPH9|I1JPH9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G33370.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000812167427615-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.2.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000081s00006736.1PF00069.20Pkinase1152882.20E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.404
SRR1783600control11.521
SRR1783602moderate drought stress21.107
SRR1811619moderate drought stress21.065

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain11.948
DRR006520Root Summer glycyrrhizin high producing strain12.237
DRR006521Root Winter glycyrrhizin high producing strain16.229
DRR006522Root Winter glycyrrhizin high producing strain15.373
DRR006523Root Summer glycyrrhizin low producing strain15.122
DRR006524Root Summer glycyrrhizin low producing strain15.623
DRR006525Leaf Summer glycyrrhizin high producing strain2.588
DRR006526Leaf Summer glycyrrhizin high producing strain2.647

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.063
SRR2868004Drought Stress(Tissue:root)13.267
SRR2967015Control (Tissue:root)13.474

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.844
SRR9715740Leave5.210
SRR9715741Leave4.810
SRR9715739Root7.352
SRR9715742Root8.528
SRR9715743Root7.001

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.874
SRR8749028MeJA induced 9h4.322
SRR8749029MeJA induced 9h3.149
SRR8749030Uninduced3.580
SRR8749031Uninduced1.927
SRR8749032Uninduced3.366

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.388
SRR8400027Control-Root14.654

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved