Gene detail information of Glyur000081s00006746.2 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09600.1 | 2.00E-78 | Homeodomain-like superfamily protein |
| NR | KHN09468.1 | 1.36E-149 | Transcription factor ASG4 [Glycine soja] |
| Swissprot | tr|Q8RWU3|RVE8_ARATH | 6.00E-101 | Protein REVEILLE 8 |
| trEMBL | tr|I1NA52|I1NA52_SOYBN | 2.00E-147 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36170.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00081 | 59848 | 62469 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB-related |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000081s00006746.2 | PF00249.26 | Myb_DNA-binding | 33 | 77 | 2.70E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.855 |
| SRR1783600 | control | 1.864 |
| SRR1783602 | moderate drought stress | 6.385 |
| SRR1811619 | moderate drought stress | 6.444 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.666 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.414 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.989 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.691 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.859 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.474 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.066 |
| SRR2967015 | Control (Tissue:root) | 0.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 31.817 |
| SRR9715740 | Leave | 39.851 |
| SRR9715741 | Leave | 41.413 |
| SRR9715739 | Root | 0.217 |
| SRR9715742 | Root | 0.178 |
| SRR9715743 | Root | 0.234 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.147 |
| SRR8400027 | Control-Root | 1.554 |