Gene detail information of Glyur000081s00006750.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G28550.32.00E-89related to AP2.7
NRXP_004493938.10PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Cicer arietinum]
Swissprottr|P47927|AP2_ARATH8.00E-93Floral homeotic protein APETALA 2
trEMBLtr|G7L1P7|G7L1P7_MEDTR0AP2 domain transcription factor {ECO:0000313|EMBL:AES81788.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000817078874114+


Gene family

Gene familysubfamily
Transcription Factors FamilyAP2
EAR motif-containing ProteinsAP2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003677  DNA binding

GO:0003700  transcription factor activity, sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000081s00006750.2PF00847.15AP21421911.90E-14
Glyur000081s00006750.2PF00847.15AP22342847.60E-11


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.056
SRR1783600control1.894
SRR1783602moderate drought stress2.407
SRR1811619moderate drought stress2.458

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.943
DRR006520Root Summer glycyrrhizin high producing strain0.989
DRR006521Root Winter glycyrrhizin high producing strain1.514
DRR006522Root Winter glycyrrhizin high producing strain1.358
DRR006523Root Summer glycyrrhizin low producing strain0.233
DRR006524Root Summer glycyrrhizin low producing strain0.233
DRR006525Leaf Summer glycyrrhizin high producing strain5.588
DRR006526Leaf Summer glycyrrhizin high producing strain5.175

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)2.136
SRR2868004Drought Stress(Tissue:root)1.651
SRR2967015Control (Tissue:root)2.156

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.048
SRR9715740Leave2.020
SRR9715741Leave3.618
SRR9715739Root0.355
SRR9715742Root2.279
SRR9715743Root2.207

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.000
SRR8749028MeJA induced 9h0.019
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.000

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.379
SRR8400027Control-Root7.172

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved