Gene detail information of Glyur000082s00007563.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G49470.30PAS domain-containing protein tyrosine kinase family protein
NRXP_003529520.10PREDICTED: probable serine/threonine-protein kinase DDB_G0282963-like isoform X1 [Glycine max]
COGYP_001958461.13.00E-44hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q9FPR3|EDR1_ARATH2.00E-110Serine/threonine-protein kinase EDR1
trEMBLtr|I1KMQ9|I1KMQ9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G36830.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000824598451842+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0004871  signal transducer activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000082s00007563.2PF13426.1PAS_91322172.10E-09
Glyur000082s00007563.2PF07714.12Pkinase_Tyr4847361.40E-68


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.510
SRR1783600control11.556
SRR1783602moderate drought stress17.243
SRR1811619moderate drought stress17.147

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.118
DRR006520Root Summer glycyrrhizin high producing strain14.392
DRR006521Root Winter glycyrrhizin high producing strain8.793
DRR006522Root Winter glycyrrhizin high producing strain8.715
DRR006523Root Summer glycyrrhizin low producing strain32.060
DRR006524Root Summer glycyrrhizin low producing strain32.327
DRR006525Leaf Summer glycyrrhizin high producing strain14.064
DRR006526Leaf Summer glycyrrhizin high producing strain14.253

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)30.193
SRR2868004Drought Stress(Tissue:root)29.795
SRR2967015Control (Tissue:root)33.688

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave17.375
SRR9715740Leave18.271
SRR9715741Leave22.174
SRR9715739Root6.035
SRR9715742Root18.280
SRR9715743Root17.019

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.156
SRR8749028MeJA induced 9h29.426
SRR8749029MeJA induced 9h12.612
SRR8749030Uninduced15.729
SRR8749031Uninduced17.327
SRR8749032Uninduced10.466

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.757
SRR8400027Control-Root22.938

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved