Gene detail information of Glyur000082s00007576.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G16990.15.00E-78Haem oxygenase-like, multi-helical
NRXP_003609761.15.05E-142Seed maturation protein PM36 [Medicago truncatula]
COGYP_007079140.19.00E-34transcription activator [Pleurocapsa sp. PCC 7327]
Swissprottr|Q9SWB6|PM36_SOYBN1.00E-138Seed maturation protein PM36
trEMBLtr|G7JMU3|G7JMU3_MEDTR2.00E-142Seed maturation PM36-like protein {ECO:0000313|EMBL:AES91958.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00082145318146893+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K20896TENA_E EC:3.5.1.- 3.5.99.- Thiamine metabolism map00730


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000082s00007576.1PF03070.11TENA_THI-4232305.30E-44


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.203
SRR1783600control14.971
SRR1783602moderate drought stress21.372
SRR1811619moderate drought stress20.643

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain23.635
DRR006520Root Summer glycyrrhizin high producing strain21.981
DRR006521Root Winter glycyrrhizin high producing strain13.190
DRR006522Root Winter glycyrrhizin high producing strain12.301
DRR006523Root Summer glycyrrhizin low producing strain10.182
DRR006524Root Summer glycyrrhizin low producing strain10.435
DRR006525Leaf Summer glycyrrhizin high producing strain7.261
DRR006526Leaf Summer glycyrrhizin high producing strain6.925

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.230
SRR2868004Drought Stress(Tissue:root)7.861
SRR2967015Control (Tissue:root)7.199

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.690
SRR9715740Leave7.859
SRR9715741Leave10.505
SRR9715739Root4.926
SRR9715742Root17.406
SRR9715743Root13.083

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.885
SRR8749028MeJA induced 9h3.434
SRR8749029MeJA induced 9h3.631
SRR8749030Uninduced1.151
SRR8749031Uninduced0.195
SRR8749032Uninduced0.844

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.287
SRR8400027Control-Root32.082

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved