Gene detail information of Glyur000082s00007586.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G16950.10lipoamide dehydrogenase 1
NRXP_003609754.10Dihydrolipoyl dehydrogenase [Medicago truncatula]
COGYP_007124726.10dihydrolipoamide dehydrogenase [Microcoleus sp. PCC 7113]
Swissprottr|A8MS68|PLPD1_ARATH0Dihydrolipoyl dehydrogenase 1, chloroplastic (Precursor)
trEMBLtr|G7JMT6|G7JMT6_MEDTR0Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00082200315206786+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00382DLD, lpd, pdhD EC:1.8.1.4 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Citrate cycle (TCA cycle)map00020
Pyruvate metabolismmap00620
Glyoxylate and dicarboxylate metabolismmap00630
Propanoate metabolismmap00640
Glycine, serine and threonine metabolismmap00260
Valine, leucine and isoleucine degradationmap00280


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016668  oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor

GO:0050660  flavin adenine dinucleotide binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000082s00007586.1PF07992.9Pyr_redox_2883711.40E-32
Glyur000082s00007586.1PF00070.22Pyr_redox2232983.30E-15
Glyur000082s00007586.1PF02852.17Pyr_redox_dim4035148.90E-31


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control32.453
SRR1783600control32.362
SRR1783602moderate drought stress23.782
SRR1811619moderate drought stress23.639

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.825
DRR006520Root Summer glycyrrhizin high producing strain20.815
DRR006521Root Winter glycyrrhizin high producing strain8.618
DRR006522Root Winter glycyrrhizin high producing strain8.442
DRR006523Root Summer glycyrrhizin low producing strain17.699
DRR006524Root Summer glycyrrhizin low producing strain17.647
DRR006525Leaf Summer glycyrrhizin high producing strain16.480
DRR006526Leaf Summer glycyrrhizin high producing strain16.644

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)75.158
SRR2868004Drought Stress(Tissue:root)41.654
SRR2967015Control (Tissue:root)43.986

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.403
SRR9715740Leave10.797
SRR9715741Leave10.453
SRR9715739Root12.409
SRR9715742Root19.906
SRR9715743Root17.885

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.807
SRR8749028MeJA induced 9h19.575
SRR8749029MeJA induced 9h21.229
SRR8749030Uninduced10.999
SRR8749031Uninduced9.000
SRR8749032Uninduced5.614

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root86.046
SRR8400027Control-Root83.739

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved