Gene detail information of Glyur000083s00006952.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G47470.13.00E-143thioredoxin family protein
NRXP_004494538.10PREDICTED: probable protein disulfide-isomerase A6-like isoform X1 [Cicer arietinum]
COGNP_622856.15.00E-20thiol-disulfide isomerase [Thermoanaerobacter tengcongensis MB4]
Swissprottr|P38661|PDIA6_MEDSA0Probable protein disulfide-isomerase A6 (Precursor)
trEMBLtr|C6TAX0|C6TAX0_SOYBN0Putative uncharacterized protein {ECO:0000313|EMBL:ACU18972.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000838533488176-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K09584PDIA6, TXNDC7 EC:5.3.4.1 Protein processing in endoplasmic reticulum map04141


Gene Ontology

biological_process

GO:0045454  cell redox homeostasis


cellular_component

GO:0005783  endoplasmic reticulum


molecular_function

GO:0016853  isomerase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000083s00006952.1PF00085.15Thioredoxin311472.30E-31
Glyur000083s00006952.1PF00085.15Thioredoxin1632671.50E-32
Glyur000083s00006952.1PF07749.7ERp292843782.50E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.306
SRR1783600control8.854
SRR1783602moderate drought stress2.903
SRR1811619moderate drought stress3.114

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.703
DRR006520Root Summer glycyrrhizin high producing strain4.468
DRR006521Root Winter glycyrrhizin high producing strain1.845
DRR006522Root Winter glycyrrhizin high producing strain2.059
DRR006523Root Summer glycyrrhizin low producing strain2.433
DRR006524Root Summer glycyrrhizin low producing strain2.242
DRR006525Leaf Summer glycyrrhizin high producing strain0.100
DRR006526Leaf Summer glycyrrhizin high producing strain0.204

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.837
SRR2868004Drought Stress(Tissue:root)2.194
SRR2967015Control (Tissue:root)2.169

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.192
SRR9715740Leave0.444
SRR9715741Leave0.115
SRR9715739Root2.120
SRR9715742Root0.636
SRR9715743Root0.814

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h5.225
SRR8749028MeJA induced 9h2.356
SRR8749029MeJA induced 9h3.712
SRR8749030Uninduced0.311
SRR8749031Uninduced0.088
SRR8749032Uninduced0.596

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root8.548
SRR8400027Control-Root11.381

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved