Gene detail information of Glyur000083s00006954.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02080.15.00E-93secretion-associated RAS super family 2
NRXP_004494541.11.17E-135PREDICTED: GTP-binding protein SAR1A-like [Cicer arietinum]
COGYP_001737337.12.00E-19small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
Swissprottr|O04834|SAR1A_ARATH3.00E-133GTP-binding protein SAR1A
trEMBLtr|C6SW20|C6SW20_SOYBN5.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G39110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000839568598022-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07953SAR1 EC:3.6.5.- Protein processing in endoplasmic reticulum map04141
Legionellosismap05134


Gene Ontology

biological_process

GO:0006886  intracellular protein transport

GO:0007264  small GTPase mediated signal transduction


cellular_component

GO:0005622  intracellular


molecular_function

GO:0005525  GTP binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000083s00006954.1PF00025.16Arf81921.10E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control94.005
SRR1783600control93.885
SRR1783602moderate drought stress92.530
SRR1811619moderate drought stress91.777

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain129.447
DRR006520Root Summer glycyrrhizin high producing strain128.518
DRR006521Root Winter glycyrrhizin high producing strain163.483
DRR006522Root Winter glycyrrhizin high producing strain160.486
DRR006523Root Summer glycyrrhizin low producing strain147.712
DRR006524Root Summer glycyrrhizin low producing strain147.919
DRR006525Leaf Summer glycyrrhizin high producing strain34.962
DRR006526Leaf Summer glycyrrhizin high producing strain34.930

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)213.964
SRR2868004Drought Stress(Tissue:root)195.124
SRR2967015Control (Tissue:root)189.820

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave69.328
SRR9715740Leave71.593
SRR9715741Leave77.521
SRR9715739Root239.290
SRR9715742Root131.871
SRR9715743Root153.767

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h169.430
SRR8749028MeJA induced 9h141.888
SRR8749029MeJA induced 9h155.430
SRR8749030Uninduced93.050
SRR8749031Uninduced57.983
SRR8749032Uninduced95.261

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root172.120
SRR8400027Control-Root176.790

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved