Gene detail information of Glyur000083s00006974.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G09420.10glucose-6-phosphate dehydrogenase 4
NRXP_007163302.10hypothetical protein PHAVU_001G223300g [Phaseolus vulgaris]
COGYP_005366914.19.00E-98glucose-6-phosphate 1-dehydrogenase [Corallococcus coralloides DSM 2259]
Swissprottr|Q93ZW0|G6PD4_ARATH0Glucose-6-phosphate 1-dehydrogenase 4, chloroplastic (Precursor)
trEMBLtr|V7D267|V7D267_PHAVU0Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|RuleBase:RU000497}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00083214655220841-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00036G6PD, zwf EC:1.1.1.49 1.1.1.363 Carbon metabolism map01200
Pentose phosphate pathwaymap00030
Glutathione metabolismmap00480
Central carbon metabolism in cancermap05230


Gene Ontology

biological_process

GO:0006006  glucose metabolic process

GO:0055114  oxidation-reduction process


molecular_function

GO:0004345  glucose-6-phosphate dehydrogenase activity

GO:0050661  NADP binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000083s00006974.1PF00479.17G6PD_N1513122.90E-39
Glyur000083s00006974.1PF02781.11G6PD_C3166022.90E-83


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.340
SRR1783600control16.443
SRR1783602moderate drought stress17.991
SRR1811619moderate drought stress18.148

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.789
DRR006520Root Summer glycyrrhizin high producing strain16.589
DRR006521Root Winter glycyrrhizin high producing strain10.446
DRR006522Root Winter glycyrrhizin high producing strain10.324
DRR006523Root Summer glycyrrhizin low producing strain14.860
DRR006524Root Summer glycyrrhizin low producing strain15.009
DRR006525Leaf Summer glycyrrhizin high producing strain16.319
DRR006526Leaf Summer glycyrrhizin high producing strain16.368

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)12.992
SRR2868004Drought Stress(Tissue:root)12.598
SRR2967015Control (Tissue:root)14.690

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.575
SRR9715740Leave13.971
SRR9715741Leave14.068
SRR9715739Root4.232
SRR9715742Root8.286
SRR9715743Root7.084

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.484
SRR8749028MeJA induced 9h6.904
SRR8749029MeJA induced 9h5.592
SRR8749030Uninduced4.824
SRR8749031Uninduced2.823
SRR8749032Uninduced2.538

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root18.041
SRR8400027Control-Root18.642

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved