Gene detail information of Glyur000084s00009470.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58400.11.00E-116Peroxidase superfamily protein
NRAFK45898.10unknown [Lotus japonicus]
Swissprottr|A7NY33|PER4_VITVI1.00E-162Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor)
trEMBLtr|I3T056|I3T056_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK45898.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold0008439767882+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000084s00009470.1PF00141.18peroxidase492935.80E-81


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.795
SRR1783600control2.882
SRR1783602moderate drought stress5.870
SRR1811619moderate drought stress5.601

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.377
DRR006520Root Summer glycyrrhizin high producing strain4.341
DRR006521Root Winter glycyrrhizin high producing strain1.240
DRR006522Root Winter glycyrrhizin high producing strain1.322
DRR006523Root Summer glycyrrhizin low producing strain10.493
DRR006524Root Summer glycyrrhizin low producing strain10.671
DRR006525Leaf Summer glycyrrhizin high producing strain29.221
DRR006526Leaf Summer glycyrrhizin high producing strain29.744

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)20.242
SRR2868004Drought Stress(Tissue:root)29.336
SRR2967015Control (Tissue:root)28.663

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave32.672
SRR9715740Leave20.238
SRR9715741Leave29.864
SRR9715739Root3.072
SRR9715742Root9.832
SRR9715743Root7.243

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h85.230
SRR8749028MeJA induced 9h249.403
SRR8749029MeJA induced 9h107.650
SRR8749030Uninduced1435.416
SRR8749031Uninduced1414.131
SRR8749032Uninduced928.438

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root20.367
SRR8400027Control-Root8.035

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved