Gene detail information of Glyur000084s00009476.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58380.12.00E-171SOS3-interacting protein 1
NRKHN40977.10CBL-interacting serine/threonine-protein kinase 10 [Glycine soja]
COGYP_007468874.12.00E-34serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9C562|CIPKA_ARATH0CBL-interacting serine/threonine-protein kinase 10
trEMBLtr|I1JHK8|I1JHK8_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G40110.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000844268945368+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000084s00009476.1PF00069.20Pkinase122661.50E-75
Glyur000084s00009476.1PF03822.9NAF3193772.10E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.696
SRR1783600control4.775
SRR1783602moderate drought stress11.360
SRR1811619moderate drought stress10.765

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain21.137
DRR006520Root Summer glycyrrhizin high producing strain20.773
DRR006521Root Winter glycyrrhizin high producing strain10.326
DRR006522Root Winter glycyrrhizin high producing strain10.290
DRR006523Root Summer glycyrrhizin low producing strain19.335
DRR006524Root Summer glycyrrhizin low producing strain19.165
DRR006525Leaf Summer glycyrrhizin high producing strain27.264
DRR006526Leaf Summer glycyrrhizin high producing strain26.836

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.044
SRR2868004Drought Stress(Tissue:root)4.912
SRR2967015Control (Tissue:root)3.326

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.483
SRR9715740Leave24.876
SRR9715741Leave44.815
SRR9715739Root5.399
SRR9715742Root15.832
SRR9715743Root14.031

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h12.956
SRR8749028MeJA induced 9h15.642
SRR8749029MeJA induced 9h10.229
SRR8749030Uninduced11.292
SRR8749031Uninduced1.827
SRR8749032Uninduced4.372

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root11.496
SRR8400027Control-Root8.529

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved