Gene detail information of Glyur000084s00009486.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G58350.11.00E-176with no lysine (K) kinase 4
NRXP_004490711.10PREDICTED: probable serine/threonine-protein kinase WNK4-like [Cicer arietinum]
COGYP_315458.12.00E-20Serine/threonine protein kinase [Thiobacillus denitrificans ATCC 25259]
Swissprottr|Q9LVL5|WNK4_ARATH0Probable serine/threonine-protein kinase WNK4
trEMBLtr|G7K0S2|G7K0S2_MEDTR0WNK kinase {ECO:0000313|EMBL:AES98977.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00084116355122372-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.1.5.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000084s00009486.3PF00069.20Pkinase301725.60E-25
Glyur000084s00009486.3PF07714.12Pkinase_Tyr1762242.20E-06


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control6.926
SRR1783600control6.941
SRR1783602moderate drought stress10.114
SRR1811619moderate drought stress9.987

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.207
DRR006520Root Summer glycyrrhizin high producing strain12.151
DRR006521Root Winter glycyrrhizin high producing strain18.211
DRR006522Root Winter glycyrrhizin high producing strain17.686
DRR006523Root Summer glycyrrhizin low producing strain12.052
DRR006524Root Summer glycyrrhizin low producing strain12.008
DRR006525Leaf Summer glycyrrhizin high producing strain10.376
DRR006526Leaf Summer glycyrrhizin high producing strain10.338

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)22.093
SRR2868004Drought Stress(Tissue:root)41.979
SRR2967015Control (Tissue:root)33.476

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave21.100
SRR9715740Leave17.309
SRR9715741Leave23.813
SRR9715739Root2.555
SRR9715742Root19.103
SRR9715743Root16.025

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h16.640
SRR8749028MeJA induced 9h47.043
SRR8749029MeJA induced 9h14.497
SRR8749030Uninduced47.586
SRR8749031Uninduced26.804
SRR8749032Uninduced17.982

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.589
SRR8400027Control-Root32.214

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved