Gene detail information of Glyur000084s00009503.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G08160.11.00E-174serine/threonine protein kinase 3
NRXP_003609185.10Serine/threonine protein kinase [Medicago truncatula]
COGYP_003639563.12.00E-16serine/threonine protein kinase [Thermincola potens JR]
Swissprottr|Q683C9|AUR2_ARATH2.00E-14Serine/threonine-protein kinase Aurora-2
trEMBLtr|G7JU40|G7JU40_MEDTR0Serine/Threonine kinase family protein {ECO:0000313|EMBL:AES91382.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00084216416221557-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:5.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000084s00009503.1PF00069.20Pkinase283322.20E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.818
SRR1783600control20.880
SRR1783602moderate drought stress14.020
SRR1811619moderate drought stress14.001

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.659
DRR006520Root Summer glycyrrhizin high producing strain20.439
DRR006521Root Winter glycyrrhizin high producing strain22.941
DRR006522Root Winter glycyrrhizin high producing strain22.137
DRR006523Root Summer glycyrrhizin low producing strain18.949
DRR006524Root Summer glycyrrhizin low producing strain18.598
DRR006525Leaf Summer glycyrrhizin high producing strain12.671
DRR006526Leaf Summer glycyrrhizin high producing strain12.460

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)56.737
SRR2868004Drought Stress(Tissue:root)45.297
SRR2967015Control (Tissue:root)38.962

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.848
SRR9715740Leave20.762
SRR9715741Leave26.864
SRR9715739Root28.857
SRR9715742Root34.152
SRR9715743Root33.637

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.149
SRR8749028MeJA induced 9h21.237
SRR8749029MeJA induced 9h14.840
SRR8749030Uninduced11.014
SRR8749031Uninduced5.830
SRR8749032Uninduced6.926

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.716
SRR8400027Control-Root46.298

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved