Gene detail information of Glyur000084s00009525.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G23090.37.00E-52nuclear factor Y, subunit B13
NRXP_007155169.12.16E-77hypothetical protein PHAVU_003G179300g [Phaseolus vulgaris]
Swissprottr|P49592|NC2B_ARATH2.00E-63Protein Dr1 homolog
trEMBLtr|V7CAL0|V7CAL0_PHAVU8.00E-78Uncharacterized protein {ECO:0000313|EMBL:ESW27164.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00084310923314397+


Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0005622  intracellular


molecular_function

GO:0043565  sequence-specific DNA binding

GO:0046982  protein heterodimerization activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000084s00009525.1PF00808.18CBFD_NFYB_HMF18493.00E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.704
SRR1783600control19.650
SRR1783602moderate drought stress23.403
SRR1811619moderate drought stress22.828

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain57.189
DRR006520Root Summer glycyrrhizin high producing strain56.687
DRR006521Root Winter glycyrrhizin high producing strain66.415
DRR006522Root Winter glycyrrhizin high producing strain64.371
DRR006523Root Summer glycyrrhizin low producing strain81.112
DRR006524Root Summer glycyrrhizin low producing strain80.376
DRR006525Leaf Summer glycyrrhizin high producing strain30.530
DRR006526Leaf Summer glycyrrhizin high producing strain30.982

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)36.487
SRR2868004Drought Stress(Tissue:root)44.300
SRR2967015Control (Tissue:root)39.375

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave67.772
SRR9715740Leave58.469
SRR9715741Leave75.817
SRR9715739Root14.505
SRR9715742Root35.548
SRR9715743Root32.119

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h95.887
SRR8749028MeJA induced 9h76.884
SRR8749029MeJA induced 9h135.506
SRR8749030Uninduced127.322
SRR8749031Uninduced123.300
SRR8749032Uninduced122.968

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root38.615
SRR8400027Control-Root38.737

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved