Gene detail information of Glyur000084s00009530.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G05340.15.00E-48Peroxidase superfamily protein
NRXP_007141708.13.62E-72hypothetical protein PHAVU_008G218500g [Phaseolus vulgaris]
Swissprottr|A7NY33|PER4_VITVI4.00E-62Peroxidase 4 {ECO:0000250|UniProtKB:Q42578} (Precursor)
trEMBLtr|V7B744|V7B744_PHAVU1.00E-72Uncharacterized protein {ECO:0000313|EMBL:ESW13702.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00084325461326812-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000084s00009530.1PF00141.18peroxidase431355.10E-32


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control17.912
SRR1783600control18.386
SRR1783602moderate drought stress12.526
SRR1811619moderate drought stress14.212

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.000
DRR006520Root Summer glycyrrhizin high producing strain0.000
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.132
DRR006524Root Summer glycyrrhizin low producing strain0.238
DRR006525Leaf Summer glycyrrhizin high producing strain0.352
DRR006526Leaf Summer glycyrrhizin high producing strain0.240

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)57.047
SRR2868004Drought Stress(Tissue:root)25.153
SRR2967015Control (Tissue:root)53.092

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.000
SRR9715740Leave0.000
SRR9715741Leave0.052
SRR9715739Root1.575
SRR9715742Root3.561
SRR9715743Root2.980

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h96.639
SRR8749028MeJA induced 9h101.286
SRR8749029MeJA induced 9h49.798
SRR8749030Uninduced33.959
SRR8749031Uninduced10.691
SRR8749032Uninduced69.123

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.781
SRR8400027Control-Root9.704

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved