Gene detail information of Glyur000085s00008847.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G48380.10BAK1-interacting receptor-like kinase 1
NRXP_003624238.10Probably inactive leucine-rich repeat receptor-like protein kinase [Medicago truncatula]
COGYP_005535717.12.00E-14serine/threonine protein kinase [Amycolatopsis mediterranei S699]
Swissprottr|Q9ASS4|Y5838_ARATH0Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (Precursor)
trEMBLtr|A2Q5X8|A2Q5X8_MEDTR0Protein kinase {ECO:0000313|EMBL:ABN08998.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000857435678013+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000085s00008847.1PF08263.7LRRNT_257991.30E-06
Glyur000085s00008847.1PF00560.28LRR_11561760.27
Glyur000085s00008847.1PF07714.12Pkinase_Tyr3075768.90E-36


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control24.494
SRR1783600control24.723
SRR1783602moderate drought stress16.517
SRR1811619moderate drought stress16.500

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.654
DRR006520Root Summer glycyrrhizin high producing strain26.079
DRR006521Root Winter glycyrrhizin high producing strain8.808
DRR006522Root Winter glycyrrhizin high producing strain8.609
DRR006523Root Summer glycyrrhizin low producing strain40.549
DRR006524Root Summer glycyrrhizin low producing strain40.410
DRR006525Leaf Summer glycyrrhizin high producing strain20.540
DRR006526Leaf Summer glycyrrhizin high producing strain20.453

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)35.444
SRR2868004Drought Stress(Tissue:root)48.521
SRR2967015Control (Tissue:root)46.878

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave60.047
SRR9715740Leave44.320
SRR9715741Leave81.081
SRR9715739Root20.016
SRR9715742Root51.732
SRR9715743Root48.048

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h37.766
SRR8749028MeJA induced 9h31.229
SRR8749029MeJA induced 9h24.571
SRR8749030Uninduced27.141
SRR8749031Uninduced9.916
SRR8749032Uninduced11.817

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root30.231
SRR8400027Control-Root31.600

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved