Gene detail information of Glyur000085s00008859.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G60400.11.00E-139Mitochondrial transcription termination factor family protein
NRXP_003624228.10hypothetical protein MTR_7g080620 [Medicago truncatula]
trEMBLtr|G7KSF7|G7KSF7_MEDTR0Transcription termination factor family protein {ECO:0000313|EMBL:AES80446.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00085126480129625+


Gene family

Gene familysubfamily
Transcription Factors FamilymTERF


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


cellular_component

GO:0005739  mitochondrion


molecular_function

GO:0003690  double-stranded DNA binding

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000085s00008859.1PF02536.9mTERF2513631.20E-06
Glyur000085s00008859.1PF02536.9mTERF4595442.50E-12


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.821
SRR1783600control3.050
SRR1783602moderate drought stress3.466
SRR1811619moderate drought stress3.530

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.685
DRR006520Root Summer glycyrrhizin high producing strain2.844
DRR006521Root Winter glycyrrhizin high producing strain2.505
DRR006522Root Winter glycyrrhizin high producing strain2.560
DRR006523Root Summer glycyrrhizin low producing strain3.223
DRR006524Root Summer glycyrrhizin low producing strain3.264
DRR006525Leaf Summer glycyrrhizin high producing strain0.822
DRR006526Leaf Summer glycyrrhizin high producing strain0.789

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.711
SRR2868004Drought Stress(Tissue:root)4.415
SRR2967015Control (Tissue:root)3.099

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.670
SRR9715740Leave2.294
SRR9715741Leave2.364
SRR9715739Root1.798
SRR9715742Root2.226
SRR9715743Root1.951

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.459
SRR8749028MeJA induced 9h1.883
SRR8749029MeJA induced 9h0.868
SRR8749030Uninduced1.140
SRR8749031Uninduced1.855
SRR8749032Uninduced1.157

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root5.564
SRR8400027Control-Root5.284

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved