Gene detail information of Glyur000085s00008879.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24090.10glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases
NRXP_004492850.10PREDICTED: glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like isoform X2 [Cicer arietinum]
COGYP_004054146.12.00E-167glutamine--fructose-6-phosphate transaminase [Marivirga tractuosa DSM 4126]
Swissprottr|O19908|GLMS_CYACA3.00E-83Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000255|HAMAP-Rule:MF_00164}
trEMBLtr|G7KRK3|G7KRK3_MEDTR0Glucosamine-fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:AES80412.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00085255161261577-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00820glmS, GFPT EC:2.6.1.16 Amino sugar and nucleotide sugar metabolism map00520
Alanine, aspartate and glutamate metabolismmap00250
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0008152  metabolic process

GO:1901137  carbohydrate derivative biosynthetic process


molecular_function

GO:0004360  glutamine-fructose-6-phosphate transaminase (isomerizing) activity

GO:0030246  carbohydrate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000085s00008879.1PF00310.16GATase_22460.00011
Glyur000085s00008879.1PF13522.1GATase_6882102.30E-16
Glyur000085s00008879.1PF01380.17SIS3704971.00E-31
Glyur000085s00008879.1PF01380.17SIS5426721.30E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control7.517
SRR1783600control7.504
SRR1783602moderate drought stress5.959
SRR1811619moderate drought stress5.864

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain12.695
DRR006520Root Summer glycyrrhizin high producing strain12.421
DRR006521Root Winter glycyrrhizin high producing strain5.581
DRR006522Root Winter glycyrrhizin high producing strain5.442
DRR006523Root Summer glycyrrhizin low producing strain21.177
DRR006524Root Summer glycyrrhizin low producing strain21.191
DRR006525Leaf Summer glycyrrhizin high producing strain9.125
DRR006526Leaf Summer glycyrrhizin high producing strain8.984

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.131
SRR2868004Drought Stress(Tissue:root)33.769
SRR2967015Control (Tissue:root)23.294

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave26.674
SRR9715740Leave13.969
SRR9715741Leave36.409
SRR9715739Root6.140
SRR9715742Root22.956
SRR9715743Root18.886

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h28.839
SRR8749028MeJA induced 9h18.916
SRR8749029MeJA induced 9h17.981
SRR8749030Uninduced38.541
SRR8749031Uninduced12.848
SRR8749032Uninduced10.013

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.631
SRR8400027Control-Root15.554

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved