Gene detail information of Glyur000085s00008894.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26440.1 | 5.00E-16 | WRKY DNA-binding protein 34 |
| NR | XP_003624172.1 | 8.93E-144 | WRKY transcription factor [Medicago truncatula] |
| Swissprot | tr|O65590|WRK34_ARATH | 1.00E-28 | Probable WRKY transcription factor 34 |
| trEMBL | tr|G7KRI1|G7KRI1_MEDTR | 3.00E-144 | WRKY family transcription factor {ECO:0000313|EMBL:AES80390.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00085 | 360524 | 364767 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000085s00008894.1 | PF03106.10 | WRKY | 381 | 402 | 2.90E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.818 |
| SRR1783600 | control | 2.750 |
| SRR1783602 | moderate drought stress | 1.397 |
| SRR1811619 | moderate drought stress | 1.431 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.260 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.442 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.824 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.780 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.993 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.730 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.219 |
| SRR2967015 | Control (Tissue:root) | 1.294 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.973 |
| SRR9715740 | Leave | 0.861 |
| SRR9715741 | Leave | 1.044 |
| SRR9715739 | Root | 0.130 |
| SRR9715742 | Root | 0.477 |
| SRR9715743 | Root | 0.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.300 |
| SRR8749028 | MeJA induced 9h | 0.087 |
| SRR8749029 | MeJA induced 9h | 0.096 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.099 |
| SRR8749032 | Uninduced | 0.409 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 2.051 |
| SRR8400027 | Control-Root | 2.156 |