Gene detail information of Glyur000086s00011507.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45780.10Leucine-rich repeat protein kinase family protein
NRXP_006594544.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g45780-like isoform X1 [Glycine max]
COGYP_004092358.19.00E-24serine/threonine protein kinase with PASTA sensor(s) [Ethanoligenens harbinense YUAN-3]
Swissprottr|C0LGU5|Y5457_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At5g45780 (Precursor)
trEMBLtr|I1M1S0|I1M1S0_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G30050.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000868463789009-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011507.1PF08263.7LRRNT_236751.20E-07
Glyur000086s00011507.1PF00560.28LRR_11341551.3
Glyur000086s00011507.1PF13855.1LRR_81582163.60E-09
Glyur000086s00011507.1PF00069.20Pkinase3265945.50E-42


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.846
SRR1783600control3.872
SRR1783602moderate drought stress3.527
SRR1811619moderate drought stress3.435

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.699
DRR006520Root Summer glycyrrhizin high producing strain3.733
DRR006521Root Winter glycyrrhizin high producing strain7.347
DRR006522Root Winter glycyrrhizin high producing strain7.113
DRR006523Root Summer glycyrrhizin low producing strain7.116
DRR006524Root Summer glycyrrhizin low producing strain7.093
DRR006525Leaf Summer glycyrrhizin high producing strain1.739
DRR006526Leaf Summer glycyrrhizin high producing strain1.822

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)15.905
SRR2868004Drought Stress(Tissue:root)13.404
SRR2967015Control (Tissue:root)17.885

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave1.988
SRR9715740Leave2.240
SRR9715741Leave2.316
SRR9715739Root1.600
SRR9715742Root3.836
SRR9715743Root4.314

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.126
SRR8749028MeJA induced 9h20.079
SRR8749029MeJA induced 9h14.605
SRR8749030Uninduced7.848
SRR8749031Uninduced5.910
SRR8749032Uninduced9.445

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root23.350
SRR8400027Control-Root23.838

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved