Gene detail information of Glyur000086s00011508.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18710.10Protein kinase superfamily protein
NRAFK40474.10unknown [Medicago truncatula]
COGYP_008149401.11.00E-23hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|Q39011|KSG7_ARATH0Shaggy-related protein kinase eta
trEMBLtr|I3SJN2|I3SJN2_MEDTR0Uncharacterized protein {ECO:0000313|EMBL:AFK40474.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000869033994628-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K14502BIN2 EC:2.7.11.1 Plant hormone signal transduction map04075


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011508.1PF00069.20Pkinase433241.40E-63


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control252.329
SRR1783600control253.103
SRR1783602moderate drought stress228.344
SRR1811619moderate drought stress225.827

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain186.823
DRR006520Root Summer glycyrrhizin high producing strain185.382
DRR006521Root Winter glycyrrhizin high producing strain199.236
DRR006522Root Winter glycyrrhizin high producing strain193.842
DRR006523Root Summer glycyrrhizin low producing strain321.956
DRR006524Root Summer glycyrrhizin low producing strain319.977
DRR006525Leaf Summer glycyrrhizin high producing strain65.851
DRR006526Leaf Summer glycyrrhizin high producing strain64.945

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)173.063
SRR2868004Drought Stress(Tissue:root)191.285
SRR2967015Control (Tissue:root)201.351

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave104.876
SRR9715740Leave110.758
SRR9715741Leave128.557
SRR9715739Root315.452
SRR9715742Root224.693
SRR9715743Root241.578

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h148.113
SRR8749028MeJA induced 9h186.477
SRR8749029MeJA induced 9h139.529
SRR8749030Uninduced102.792
SRR8749031Uninduced84.374
SRR8749032Uninduced98.590

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root233.999
SRR8400027Control-Root232.665

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved