Gene detail information of Glyur000086s00011513.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45800.13.00E-178Leucine-rich repeat protein kinase family protein
NRXP_004485908.10PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230-like [Cicer arietinum]
COGYP_004163702.14.00E-16hypothetical protein [Cellulophaga algicola DSM 14237]
Swissprottr|C0LGK9|Y2242_ARATH1.00E-102Probable LRR receptor-like serine/threonine-protein kinase At2g24230 (Precursor)
trEMBLtr|G7ZXK4|G7ZXK4_MEDTR0LRR receptor-like serine/threonine-protein kinase GSO1 {ECO:0000313|EMBL:AES83942.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00086117936121821-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011513.1PF13855.1LRR_8611193.00E-07
Glyur000086s00011513.1PF13855.1LRR_81371942.60E-11
Glyur000086s00011513.1PF00560.28LRR_12062260.079
Glyur000086s00011513.1PF07714.12Pkinase_Tyr4205901.40E-20


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.079
SRR1783600control4.025
SRR1783602moderate drought stress3.501
SRR1811619moderate drought stress3.594

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain9.521
DRR006520Root Summer glycyrrhizin high producing strain9.614
DRR006521Root Winter glycyrrhizin high producing strain4.871
DRR006522Root Winter glycyrrhizin high producing strain4.515
DRR006523Root Summer glycyrrhizin low producing strain16.473
DRR006524Root Summer glycyrrhizin low producing strain16.596
DRR006525Leaf Summer glycyrrhizin high producing strain4.651
DRR006526Leaf Summer glycyrrhizin high producing strain4.595

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.685
SRR2868004Drought Stress(Tissue:root)9.933
SRR2967015Control (Tissue:root)11.085

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave8.834
SRR9715740Leave6.301
SRR9715741Leave9.647
SRR9715739Root7.007
SRR9715742Root19.368
SRR9715743Root18.735

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h19.412
SRR8749028MeJA induced 9h23.179
SRR8749029MeJA induced 9h25.891
SRR8749030Uninduced7.014
SRR8749031Uninduced4.303
SRR8749032Uninduced10.874

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root3.180
SRR8400027Control-Root4.733

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved