Gene detail information of Glyur000086s00011514.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G18700.10CBL-interacting protein kinase 12
NRAFK41470.10unknown [Lotus japonicus]
COGYP_007468874.11.00E-37serine/threonine protein kinase [Desulfocapsa sulfexigens DSM 10523]
Swissprottr|Q9SN43|CIPKC_ARATH0CBL-interacting serine/threonine-protein kinase 12
trEMBLtr|I3SMH8|I3SMH8_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK41470.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00086128954130504+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011514.1PF00069.20Pkinase322865.60E-74
Glyur000086s00011514.1PF03822.9NAF3514084.70E-23


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.587
SRR1783600control15.628
SRR1783602moderate drought stress13.439
SRR1811619moderate drought stress13.469

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain29.854
DRR006520Root Summer glycyrrhizin high producing strain26.019
DRR006521Root Winter glycyrrhizin high producing strain20.579
DRR006522Root Winter glycyrrhizin high producing strain20.576
DRR006523Root Summer glycyrrhizin low producing strain46.838
DRR006524Root Summer glycyrrhizin low producing strain47.670
DRR006525Leaf Summer glycyrrhizin high producing strain16.993
DRR006526Leaf Summer glycyrrhizin high producing strain17.723

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.238
SRR2868004Drought Stress(Tissue:root)38.113
SRR2967015Control (Tissue:root)49.393

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave66.995
SRR9715740Leave63.509
SRR9715741Leave72.230
SRR9715739Root61.356
SRR9715742Root56.920
SRR9715743Root62.377

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.540
SRR8749028MeJA induced 9h9.443
SRR8749029MeJA induced 9h6.694
SRR8749030Uninduced7.781
SRR8749031Uninduced7.745
SRR8749032Uninduced12.056

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.014
SRR8400027Control-Root36.129

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved