Gene detail information of Glyur000086s00011515.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G45820.14.00E-151CBL-interacting protein kinase 20
NRXP_004485907.10PREDICTED: CBL-interacting serine/threonine-protein kinase 20-like [Cicer arietinum]
COGYP_823396.12.00E-36serine/threonine protein kinase [Candidatus Solibacter usitatus Ellin6076]
Swissprottr|Q9LWM4|CIPK5_ORYSJ0CBL-interacting protein kinase 5
trEMBLtr|I3SGC6|I3SGC6_LOTJA0Uncharacterized protein {ECO:0000313|EMBL:AFK39318.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00086136214137575-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.2.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0007165  signal transduction


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011515.1PF00069.20Pkinase122662.00E-78
Glyur000086s00011515.1PF03822.9NAF3183782.90E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control0.027
SRR1783600control0.027
SRR1783602moderate drought stress0.112
SRR1811619moderate drought stress0.111

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain0.200
DRR006520Root Summer glycyrrhizin high producing strain0.237
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain0.162
DRR006524Root Summer glycyrrhizin low producing strain0.088
DRR006525Leaf Summer glycyrrhizin high producing strain0.410
DRR006526Leaf Summer glycyrrhizin high producing strain0.349

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)0.365
SRR2868004Drought Stress(Tissue:root)0.163
SRR2967015Control (Tissue:root)0.152

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.379
SRR9715740Leave0.348
SRR9715741Leave0.193
SRR9715739Root0.097
SRR9715742Root0.023
SRR9715743Root0.090

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.261
SRR8749028MeJA induced 9h0.242
SRR8749029MeJA induced 9h0.134
SRR8749030Uninduced0.193
SRR8749031Uninduced0.113
SRR8749032Uninduced0.248

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root0.027
SRR8400027Control-Root0.010

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved