Gene detail

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Gene detail information of Glyur000086s00011519.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G18640.1	7.00E-160	Leucine-rich repeat protein kinase family protein
NR	KEH36609.1	0	LRR receptor-like kinase [Medicago truncatula]
COG	YP_001192956.1	1.00E-11	two component regulator [Flavobacterium johnsoniae UW101]
Swissprot	tr\|C0LGQ4\|MRH1_ARATH	0	Probable LRR receptor-like serine/threonine-protein kinase MRH1 (Precursor)
trEMBL	tr\|A0A072V5H5\|A0A072V5H5_MEDTR	0	LRR receptor-like kinase {ECO:0000313\|EMBL:KEH36613.1}

Sequence

Transcript Sequence

>Glyur000086s00011519.1
ATGGGAATGAGATGGAACACATTTGGATTTTGGTTTAGAATTTACATTGGCTTGATTTCTGTGTGGGGAATCCGAGAGTGTTGGTCGCTTAATGATGAAGGATTGGCTTTGTTGGAGTTCCGGGCAAGAATAACTTGTGATCCTTATAATGCTTTGGCAAATTGGAATCCAAATGATTGTGACCCCTGCGAGTGGTTGGGTGTTCAATGTATTGATGGTAAAGTGGATATGCTGGACCTACACGGGCTATCATTGGAAGGGACATTGGCTCCTGAGCTTGGGAAACTTAGTCACTTGAAATCTCTTCTGTTATGCAAGAATAACTTTTCTGGTGCCATTCCCAAAGAACTTGGAGATCTAGCCAAGCTAGAGTTAGTGGATTTAAGGGAGAATAACTTGTCAGGAAGTATCCCAGCAGAAATTAGCAGGATGTTATCACTAAAACACATTGTGTGGCAGTGCAACTTCAAGCAACAGGACAAACCAGATTCATTGGACAAACCAGATTCATTGATTATTCCAATTAAAGTAGCACTTCTAAAATACCTCAATGCCTTTGCGCTGCCACCACTGTGTAATGTACCAAATCTTGTCAATTCTGCTCGTCGCAAGTTACTTGATCAGTCCAGTAACCTCGCAGCTGCACCTTATAGTAGTGGGCCTAAAATTGAGTTCAGCACTGTTCCAATTACTGTAAGTAGTGGAGCTTTTCCAGCTGTGCCAGGTGCTAATAAGGAAGAGAATCAGTCACCTTCACCGCTGCCTTCTTCACCTTCTGATTCTCCACATGATGCTTCTGATGGAAATCAAATAAGTCAACAGCATTCACCTAATGGTTCTTCTGGAAATTTGTGGAAGTATATAATTATTATTATAGTTGTGGCTGTGTTGGTCATTGTTATCATAGTTCTTATTTGCATTTCGCGAAAACGAGCAGCAAAAATTATAACCCCCTGGAAGACAGGAATAAGTGGACAGTTGCAGAAAGCTTTTATAACAGGGGTCCCCAAGTTGAATAGAGAAGAACTTGAGACCGCTTGTGAGGATTTCAGCAATATCGTTGTTAGTCTTGATGCAAGCACCATATACAAAGGAACACTGTCGAGTGGAGTTGAGATTGCTGTTGTTAGTACTCTGATTAATTCTTCCCATGAATGGTCAAAGAGCATGGAGATCAACTACCGGAAAAAGATTGATACATTGTCCCGCATAAACCATAAGAACTTCATTAACCTTATTGGGTACTGTGAGGAAGAAGAACCATTCACAAGGATGTTGGTGTTTGAGTATGCTCCCAATGGAAGCCTATTTGAACACCTGCATGTTAAGGAAATTGAACGTCTTGATTGGAGTGAAAGGATGAGGATTATAATGGGCACTGCTTATTGTCTTCAGTACATGCACCATGATCTGAATCCACCATTAGCTCATAGCAAACTTACCTCAAATATGATCGTATTAACAGATGATTATGCTGCTAAGCTTGCAGAGACCGCTTTTGGAGGTATTGAATCATTGAATAAGACAACTGGAGGTAGTTCAAAGAAATCCGAGTCATCTGGAGGTAGTTCAAAGAAATCCGAATCATCGTCACGGCCTCATGCTGACCTTGAATCCAATGTCTATGACTTTGGAATATTGTTGCTGGAAATCATTTCTGGTAAATTGCGTCACTCTGAAGAACAAGGCAGTCTTGTGAACTGGGCTGCTGATTACATAAATGACAAAAGAAGCATCAGCTATATTTTAGATCCCTGCCTGAGGTCTTTCAAGGACAATGAACTAGGTGTCATATGTGAGGTGATCCAAGAGTGTATCCAACAAGATCCAAAGTTAAGACCCACAATGAGGGACATAACTTCCAGATTGAGGGAAGTGCTTGGTGTGTCACCTGAGCAAGCAGTCCCAAGACTTTCTCCACTCTGGTGGGCTGAACTGGAGATCTTGTCAGTGGAGGCCACTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00086	150334	154463	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.15.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function GO:0004672 protein kinase activity GO:0005524 ATP binding GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000086s00011519.1	PF08263.7	LRRNT_2	30	70	1.60E-11
Glyur000086s00011519.1	PF07714.12	Pkinase_Tyr	361	623	2.80E-21

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.689
SRR1783600	control	0.666
SRR1783602	moderate drought stress	0.402
SRR1811619	moderate drought stress	0.435

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.272
DRR006520	Root Summer glycyrrhizin high producing strain	0.266
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.006
DRR006523	Root Summer glycyrrhizin low producing strain	0.056
DRR006524	Root Summer glycyrrhizin low producing strain	0.056
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.484
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.584

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	5.060
SRR2868004	Drought Stress(Tissue:root)	3.740
SRR2967015	Control (Tissue:root)	2.537

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	1.067
SRR9715740	Leave	0.091
SRR9715741	Leave	0.539
SRR9715739	Root	0.000
SRR9715742	Root	0.108
SRR9715743	Root	0.031

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.683
SRR8749028	MeJA induced 9h	0.947
SRR8749029	MeJA induced 9h	1.236
SRR8749030	Uninduced	0.080
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.020

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	4.362
SRR8400027	Control-Root	4.434