Gene detail information of Glyur000086s00011521.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58670.31.00E-85Protein of unknown function (DUF1637)
NRXP_007148038.12.37E-157hypothetical protein PHAVU_006G175200g [Phaseolus vulgaris]
trEMBLtr|V7BPY1|V7BPY1_PHAVU9.00E-158Uncharacterized protein {ECO:0000313|EMBL:ESW20032.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00086159052163069+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K10712ADO EC:1.13.11.19 Taurine and hypotaurine metabolism map00430


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0047800  cysteamine dioxygenase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000086s00011521.2PF07847.7DUF1637332447.30E-67


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.674
SRR1783600control18.645
SRR1783602moderate drought stress18.602
SRR1811619moderate drought stress18.941

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain27.009
DRR006520Root Summer glycyrrhizin high producing strain27.598
DRR006521Root Winter glycyrrhizin high producing strain19.850
DRR006522Root Winter glycyrrhizin high producing strain19.727
DRR006523Root Summer glycyrrhizin low producing strain28.592
DRR006524Root Summer glycyrrhizin low producing strain29.384
DRR006525Leaf Summer glycyrrhizin high producing strain12.262
DRR006526Leaf Summer glycyrrhizin high producing strain12.482

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)43.673
SRR2868004Drought Stress(Tissue:root)38.503
SRR2967015Control (Tissue:root)35.966

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave14.830
SRR9715740Leave12.901
SRR9715741Leave17.497
SRR9715739Root14.311
SRR9715742Root17.384
SRR9715743Root16.298

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.478
SRR8749028MeJA induced 9h27.713
SRR8749029MeJA induced 9h22.204
SRR8749030Uninduced24.267
SRR8749031Uninduced18.443
SRR8749032Uninduced21.290

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root60.696
SRR8400027Control-Root44.366

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved